PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011099021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 356aa    MW: 39532.5 Da    PI: 7.3473
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011099021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP103.82.8e-3251166289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                      g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ s   ++ +++ s+s+++ g       
  XP_011099021.1  51 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQIPQGSLIgQSLEQVLSNSHHELGasqsdkh 145
                     689*************************************************************6655544466666666666555554334444 PP

             TCP  89 ....................k 89 
                                         +
  XP_011099021.1 146 glkigggsinwdindpltqpR 166
                     555556666666655555551 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-2953183IPR005333Transcription factor, TCP
PROSITE profilePS5136932.01953111IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MIPRETDFTK QESSTSHDHN PSKNFKASSS SSTTSWSRFK DPRIVRVSRA FGGKDRHSKV  60
CTVRGLRDRR VRLSVPTAIQ LYDLQDRLGL NQPSKVVDWL LNAAKHEIDE LPPLQIPQGS  120
LIGQSLEQVL SNSHHELGAS QSDKHGLKIG GGSINWDIND PLTQPRPSVF GGKSKDFEGE  180
TSGRDDQANW ARNEEDQRQF NLENQSAAYN FSSSQNPSSL PINAVNPFNS FVRWDPSNLT  240
LSHPPRSHGL MAQPEDWHNF SLVPLQPTLS TVPSGSHHHH QVLVYQPAGL STQSYFPSQM  300
PPTGTEFDPK QVNFQSSHVS NSSLSSPVHD STTQPVRPIH FNMTANLLPS QNNDGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0699802e-56KJ069980.1 Sesamum indicum clone TilSSR_41181 microsatellite Sesame_41181 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099021.10.0PREDICTED: transcription factor TCP5-like
RefseqXP_011099023.10.0PREDICTED: transcription factor TCP5-like
TrEMBLA0A068U1B65e-93A0A068U1B6_COFCA; Uncharacterized protein
STRINGVIT_14s0068g00330.t018e-89(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8212499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.12e-45TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5